mouse hippocampus slide-seq v2 data (Broad Institute Inc)
90
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Broad Institute Inc
mouse hippocampus slide-seq v2 data
Mouse Hippocampus Slide Seq V2 Data, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/slide-seq+v2/slide+seqv2/pmc11874963__Supplemental_Material_-10-24-33
Average 90 stars, based on 1 article reviews
Mouse Hippocampus Slide Seq V2 Data, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/slide-seq+v2/slide+seqv2/pmc11874963__Supplemental_Material_-10-24-33
Average 90 stars, based on 1 article reviews
mouse hippocampus slide-seq v2 data - by Bioz Stars,
2026-09
90/100 stars
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other:Article Title: Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions Article Snippet: Article Title: Cell2location maps fine-grained cell types in spatial transcriptomics. Article Snippet: 1Wellcome Sanger Institute, Hinxton, Cambridge, UK.. 2Moscow State University, Leninskie Gory, Moscow, Russia.. 3Centre for Immunobiology, Blizard Institute, Queen Mary University of London, London, UK. Article Title: BANKSY unifies cell typing and tissue domain segmentation for scalable spatial omics data analysis Article Snippet: For Slide-seq V2, we obtained the data from the Broad Institute Single Cell Portal at https://singlecell.broadinstitute.org/single_cell/study/SCP948.The MERFISH mouse hypothalamus data were obtained from https:// doi.org/10.5061/dryad.8t8s248. Article Title: Identifying multicellular spatiotemporal organization of cells with SpaceFlow Article Snippet: The Slide-seq V2 can be accessed in Squidpy package or downloaded from “Broad Institute database [ https://singlecell.broadinstitute.org/single_cell/study/SCP815/highly-sensitive-spatial-transcriptomics-at-near-cellular-resolution-with-slide-seqv2 ]”. Article Title: Identifying multicellular spatiotemporal organization of cells with SpaceFlow. Article Snippet: The Slide-seq V2 can be accessed in Squidpy package71 or 12 NATURE COMMUNICATIONS | (2022) 13:4076 | https://doi.org/10.1038/s41467-022-31739-w |www.nature.com/naturecommunications downloaded from “Broad Institute database [https://singlecell.broadinstitute.org/single_ cell/study/SCP815/highly-sensitive-spatial-transcriptomics-at-near-cellular-resolutionwith-slide-seqv2]”. Article Title: STAMarker: determining spatial domain-specific variable genes with saliency maps in deep learning. Article Snippet: The human lymph node and ouse olfactory bulb datasets are available at 10x genomics ebsite 10xgenomics.com / resources / datasets hippocampus ataset of the J20 mouse model generated by Slide-seq V2 is accessible at https:// singlecell.broadinstitute.org/ single _ cell/ study/ SCP1663/ cell- type- specific- inference- of- differentialexpression- in- spatial- transcriptomics . Article Title: Systematic comparison of sequencing-based spatial transcriptomic methods. Article Snippet: Benchmarking reference tissues and experimental design We systematically benchmarked spatial transcriptomics (sST) methods based on distinct spatial indexing strategies, encompassing microarray (probe-based and polyA-based 10X Genomics Visium13, DynaSpatial14), bead-based approaches (HDST15, BMKMANU S1000, Slide-seq V2 (ref. 16), Curio Seeker (which is the commercialized version of Slide-seq at Curio Bioscience), Slide-tag17), polony- or nanoball-based technologies (Stereo-seq18, PIXEL-seq19, Salus) and microfluidics (DBiT-seq20). |
